WL94_33800 protein (Burkholderia cepacia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

WL94_33800

annotation not available (305 aa)

Predicted Functional Partners:

WL94_33805

0.661

WL94_33795

0.601

DM42_6439

0.507

WL94_06535

0.481

WL94_33810

0.470

DM42_6456

0.456

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_6439	WL94_33800	DM42_6439	DM42_6565	annotation not available	annotation not available	0.507
DM42_6456	WL94_33800	DM42_6456	DM42_6565	annotation not available	annotation not available	0.456
WL94_06535	WL94_33800	DM42_5176	DM42_6565	annotation not available	annotation not available	0.481
WL94_33795	WL94_33800	DM42_6566	DM42_6565	Cell filamentation protein Fic	annotation not available	0.601
WL94_33795	WL94_33805	DM42_6566	DM42_6564	Cell filamentation protein Fic	annotation not available	0.420
WL94_33800	DM42_6439	DM42_6565	DM42_6439	annotation not available	annotation not available	0.507
WL94_33800	DM42_6456	DM42_6565	DM42_6456	annotation not available	annotation not available	0.456
WL94_33800	WL94_06535	DM42_6565	DM42_5176	annotation not available	annotation not available	0.481
WL94_33800	WL94_33795	DM42_6565	DM42_6566	annotation not available	Cell filamentation protein Fic	0.601
WL94_33800	WL94_33805	DM42_6565	DM42_6564	annotation not available	annotation not available	0.661
WL94_33800	WL94_33810	DM42_6565	DM42_6563	annotation not available	NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family	0.470
WL94_33805	WL94_33795	DM42_6564	DM42_6566	annotation not available	Cell filamentation protein Fic	0.420
WL94_33805	WL94_33800	DM42_6564	DM42_6565	annotation not available	annotation not available	0.661
WL94_33805	WL94_33810	DM42_6564	DM42_6563	annotation not available	NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family	0.675
WL94_33810	WL94_33800	DM42_6563	DM42_6565	NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family	annotation not available	0.470
WL94_33810	WL94_33805	DM42_6563	DM42_6564	NAD(P)H dehydrogenase (quinone); NAD(P)H-quinone oxidoreductase, type IV; flav_wrbA- NAD(P)H-quinone oxidoreductase, type IV; Belongs to the WrbA family	annotation not available	0.675

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