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DM42_6568 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6568" - Sodium:solute symporter family protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6568Sodium-solute symporter family protein (464 aa)    
Predicted Functional Partners:
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1310 aa)
   
   
  0.944
DM42_6569
annotation not available (555 aa)
 
          0.880
DM42_6570
Cobalamin synthesis cobW C-terminal domain protein (342 aa)
 
          0.816
DM42_5725
annotation not available (300 aa)
 
          0.656
DM42_5724
annotation not available (301 aa)
 
          0.640
DM42_6567
Conserved hypothetical protein (65 aa)
              0.631
WI67_31865
annotation not available (692 aa)
   
   
  0.610
WL94_09020
annotation not available (573 aa)
   
          0.588
uca
Urea_carbox- urea carboxylase (1206 aa)
   
   
  0.567
ackA
ackA- acetate kinase (399 aa)
     
        0.495
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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