Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM42_657 | clpP | DM42_657 | DM42_3175 | Uvra: excinuclease ABC subunit A | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | 0.453 |
DM42_657 | nhaA | DM42_657 | DM42_658 | Uvra: excinuclease ABC subunit A | nhaA: Na+/H+ antiporter NhaA | 0.659 |
DM42_657 | polA | DM42_657 | DM42_4183 | Uvra: excinuclease ABC subunit A | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.780 |
DM42_7351 | WL94_15690 | DM42_7351 | DM42_1444 | annotation not available | annotation not available | 0.877 |
DM42_7351 | dsbB | DM42_7351 | DM42_808 | annotation not available | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (By similarity). Required for the production of extracellular protease | 0.629 |
DM42_7351 | nhaA | DM42_7351 | DM42_658 | annotation not available | nhaA: Na+/H+ antiporter NhaA | 0.699 |
WL94_14115 | nhaA | DM42_2285 | DM42_658 | annotation not available | nhaA: Na+/H+ antiporter NhaA | 0.794 |
WL94_14115 | polA | DM42_2285 | DM42_4183 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.578 |
WL94_14115 | trmE | DM42_2285 | DM42_1792 | annotation not available | tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family | 0.447 |
WL94_15690 | DM42_7351 | DM42_1444 | DM42_7351 | annotation not available | annotation not available | 0.877 |
WL94_15690 | dsbB | DM42_1444 | DM42_808 | annotation not available | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (By similarity). Required for the production of extracellular protease | 0.547 |
WL94_15690 | nhaA | DM42_1444 | DM42_658 | annotation not available | nhaA: Na+/H+ antiporter NhaA | 0.625 |
ackA | clpP | DM42_4870 | DM42_3175 | ackA: acetate kinase | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | 0.531 |
ackA | nhaA | DM42_4870 | DM42_658 | ackA: acetate kinase | nhaA: Na+/H+ antiporter NhaA | 0.605 |
ackA | polA | DM42_4870 | DM42_4183 | ackA: acetate kinase | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.695 |
clpP | DM42_657 | DM42_3175 | DM42_657 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | Uvra: excinuclease ABC subunit A | 0.453 |
clpP | ackA | DM42_3175 | DM42_4870 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | ackA: acetate kinase | 0.531 |
clpP | nhaA | DM42_3175 | DM42_658 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | nhaA: Na+/H+ antiporter NhaA | 0.664 |
clpP | polA | DM42_3175 | DM42_4183 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.717 |
clpP | secY | DM42_3175 | DM42_1453 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently | 0.546 |
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