STRINGSTRING
DM42_660 protein (Burkholderia cepacia) - STRING interaction network
"DM42_660" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_660annotation not available (435 aa)    
Predicted Functional Partners:
DM42_661
fghA_ester_D- S-formylglutathione hydrolase (276 aa)
              0.814
DM42_659
annotation not available (437 aa)
   
        0.702
DM42_662
Conserved hypothetical protein (444 aa)
              0.646
WL94_15815
annotation not available (1567 aa)
   
   
  0.612
nhaA
nhaA- Na+/H+ antiporter NhaA (592 aa)
   
        0.477
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
 
  0.463
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily (248 aa)
       
      0.445
WL94_16020
annotation not available (252 aa)
     
   
  0.414
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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