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DM42_6606 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6606" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6606annotation not available (175 aa)    
Predicted Functional Partners:
DM42_6607
annotation not available (261 aa)
          0.960
DM42_6645
annotation not available (438 aa)
   
          0.746
garD
galactar-dH20- galactarate dehydratase (517 aa)
 
   
  0.738
gudD
Glucar-dehydr- glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family (450 aa)
 
      0.708
WL94_02950
annotation not available (465 aa)
 
      0.705
DM42_6605
annotation not available (309 aa)
   
        0.693
exuT
annotation not available (423 aa)
   
          0.631
DM42_4428
annotation not available (432 aa)
   
          0.619
WL94_01660
annotation not available (430 aa)
   
          0.585
DM42_6608
annotation not available (316 aa)
              0.565
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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