STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6652
annotation not available (374 aa)
Predicted Functional Partners:
DM42_6650
annotation not available
0.986
DM42_6651
annotation not available
0.980
WL94_11090
annotation not available
0.865
DM42_6653
annotation not available
0.775
WL94_11095
annotation not available
0.760
WL94_08185
annotation not available
0.748
DM42_6649
annotation not available
0.720
DM43_1101
annotation not available
0.580
WI67_20310
annotation not available
0.556
WL94_25230
soxA: sarcosine oxidase, alpha subunit; Belongs to the GcvT family