• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
DM42_6667 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6667" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6667Conserved hypothetical protein (108 aa)    
Predicted Functional Partners:
DM42_6666
annotation not available (176 aa)
 
          0.969
DM42_6668
annotation not available (281 aa)
 
          0.906
WL94_18090
annotation not available (297 aa)
 
          0.821
DM42_6571
Conserved hypothetical protein (356 aa)
   
          0.555
DM42_4653
Conserved hypothetical protein (347 aa)
   
          0.539
DM42_6664
annotation not available (329 aa)
 
          0.533
DM42_6995
annotation not available (94 aa)
   
          0.513
DM42_6900
annotation not available (337 aa)
   
          0.498
WL94_32720
annotation not available (370 aa)
   
          0.490
DM42_5558
fkbM_fam- methyltransferase, FkbM family domain protein (657 aa)
   
          0.488
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (14%) [HD]