STRINGSTRING
xadA protein (Burkholderia cepacia) - STRING interaction network
"xadA" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xadAannotation not available (1453 aa)    
Predicted Functional Partners:
DM42_5825
annotation not available (2365 aa)
 
     
  0.720
DM42_3426
annotation not available (321 aa)
    
          0.652
DM42_4722
annotation not available (287 aa)
    
          0.639
DM42_393
Conserved hypothetical protein (580 aa)
 
   
  0.634
DM42_3849
Conserved hypothetical protein (272 aa)
    
          0.577
DM42_1354
annotation not available (330 aa)
    
          0.573
DM42_6816
annotation not available (4237 aa)
 
     
  0.565
DM42_6731
annotation not available (220 aa)
   
   
  0.558
DM42_6298
Conserved hypothetical protein (139 aa)
    
          0.552
WL94_11185
Uncharacterized protein (190 aa)
    
          0.548
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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