DM42_6748 protein (Burkholderia cepacia) - STRING interaction network

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

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Predicted Interactions

gene neighborhood

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Score

DM42_6748

annotation not available (199 aa)

Predicted Functional Partners:

WI67_12750

0.756

WI67_02590

0.456

rplE

0.451

rpsS

0.437

ahpC

0.425

DM42_3157

0.425

WI67_03875

0.425

rpsJ

0.423

rplN

0.418

Your Current Organism:

Burkholderia cepacia

NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM42_3157	DM42_6748	DM42_3157	DM42_6748	annotation not available	annotation not available	0.425
DM42_3157	WI67_02590	DM42_3157	DM42_1274	annotation not available	annotation not available	0.607
DM42_6748	DM42_3157	DM42_6748	DM42_3157	annotation not available	annotation not available	0.425
DM42_6748	WI67_02590	DM42_6748	DM42_1274	annotation not available	annotation not available	0.456
DM42_6748	WI67_03875	DM42_6748	DM42_1017	annotation not available	Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein	0.425
DM42_6748	WI67_12750	DM42_6748	DM42_2708	annotation not available	phzF_- phenazine biosynthesis , PhzF family protein	0.756
DM42_6748	ahpC	DM42_6748	DM42_3874	annotation not available	Alkyl hydroperoxide reductase; ahpC- peroxiredoxin	0.425
DM42_6748	rplE	DM42_6748	DM42_1461	annotation not available	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs	0.451
DM42_6748	rplN	DM42_6748	DM42_1463	annotation not available	50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome	0.418
DM42_6748	rpsJ	DM42_6748	DM42_1474	annotation not available	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes	0.423
DM42_6748	rpsS	DM42_6748	DM42_1469	annotation not available	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA	0.437
WI67_02590	DM42_3157	DM42_1274	DM42_3157	annotation not available	annotation not available	0.607
WI67_02590	DM42_6748	DM42_1274	DM42_6748	annotation not available	annotation not available	0.456
WI67_02590	WI67_03875	DM42_1274	DM42_1017	annotation not available	Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein	0.607
WI67_02590	ahpC	DM42_1274	DM42_3874	annotation not available	Alkyl hydroperoxide reductase; ahpC- peroxiredoxin	0.607
WI67_03875	DM42_6748	DM42_1017	DM42_6748	Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein	annotation not available	0.425
WI67_03875	WI67_02590	DM42_1017	DM42_1274	Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein	annotation not available	0.607
WI67_12750	DM42_6748	DM42_2708	DM42_6748	phzF_- phenazine biosynthesis , PhzF family protein	annotation not available	0.756
ahpC	DM42_6748	DM42_3874	DM42_6748	Alkyl hydroperoxide reductase; ahpC- peroxiredoxin	annotation not available	0.425
ahpC	WI67_02590	DM42_3874	DM42_1274	Alkyl hydroperoxide reductase; ahpC- peroxiredoxin	annotation not available	0.607

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