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DM42_6773 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6773" - TTC: tartrate dehydrogenase in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6773TTC- tartrate dehydrogenase (367 aa)    
Predicted Functional Partners:
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the aconitase/IPM isomerase family. LeuC type 1 subfamily (469 aa)
 
  0.910
WL94_14460
TTC- tartrate dehydrogenase (360 aa)
   
   
 
0.905
WI67_16945
TTC- tartrate dehydrogenase (361 aa)
   
   
 
0.902
WL94_15815
annotation not available (1567 aa)
   
   
  0.873
DM42_6772
annotation not available (482 aa)
   
 
  0.864
ilvB
Acolac_lg- acetolactate synthase, large subunit, biosynthetic type (587 aa)
  0.833
ilvN
Acolac_sm- acetolactate synthase, small subunit (163 aa)
 
 
  0.826
leuD
3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the LeuD family. LeuD type 1 subfamily (216 aa)
   
  0.804
WL94_03370
annotation not available (567 aa)
  0.781
WL94_27150
annotation not available (546 aa)
 
  0.733
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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