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STRINGSTRING
DM42_6820 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6820" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6820annotation not available (412 aa)    
Predicted Functional Partners:
DM42_6822
annotation not available (283 aa)
 
 
  0.934
DM42_6821
annotation not available (305 aa)
 
 
  0.920
DM42_6823
annotation not available (656 aa)
 
     
  0.879
WL94_00910
annotation not available (283 aa)
 
 
  0.857
DM42_6819
annotation not available (384 aa)
 
 
  0.825
WL94_00905
annotation not available (314 aa)
 
 
  0.804
WL94_00895
annotation not available (661 aa)
 
     
  0.781
WL94_20580
annotation not available (285 aa)
 
 
  0.736
WL94_38450
annotation not available (286 aa)
 
 
  0.667
WI67_13950
annotation not available (283 aa)
 
 
  0.662
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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