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DM42_6828 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6828" - tonB-siderophor: TonB-dependent siderophore receptor family protein in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
DM42_6828tonB-siderophor- TonB-dependent siderophore receptor family protein (724 aa)    
Predicted Functional Partners:
fcuA
annotation not available (726 aa)
   
   
  0.601
WL94_20365
annotation not available (787 aa)
 
 
  0.580
DM42_4531
tonB_Cterm- TonB family C-terminal domain protein (271 aa)
 
 
  0.575
WL94_28985
Cyc_pep_trnsptr- cyclic peptide transporter family protein (581 aa)
 
   
  0.518
DM42_2868
tonB_Cterm- TonB family C-terminal domain protein (97 aa)
   
 
  0.515
DM42_848
tonB_Cterm- TonB family C-terminal domain protein (163 aa)
   
 
  0.511
WI67_09155
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (233 aa)
   
 
  0.511
tolA
tolA_full- protein TolA (351 aa)
   
 
  0.511
fhuF
Iron reductase; fe_III_red_FhuF- siderophore-iron reductase FhuF (266 aa)
 
        0.417
DM42_6827
Conserved hypothetical protein (302 aa)
              0.417
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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