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DM42_6845 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6845" - acyl-CoA dehydrogenase, N-terminal domain protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6845acyl-CoA dehydrogenase, N-terminal domain protein (371 aa)    
Predicted Functional Partners:
DM42_6846
ahpD_dom- alkylhydroperoxidase AhpD family core domain protein (188 aa)
 
        0.972
DM42_6843
annotation not available (396 aa)
 
        0.968
DM42_6842
annotation not available (275 aa)
 
        0.953
DM42_6844
annotation not available (264 aa)
 
        0.946
DM42_6847
annotation not available (318 aa)
 
          0.859
DM42_6501
annotation not available (97 aa)
 
          0.667
DM42_6669
annotation not available (84 aa)
   
        0.488
WL94_05915
annotation not available (311 aa)
   
 
  0.473
DM42_6352
annotation not available (314 aa)
   
 
  0.473
WI67_29470
annotation not available (389 aa)
   
 
  0.473
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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