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DM42_6864 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6864" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6864annotation not available (468 aa)    
Predicted Functional Partners:
DM42_6863
citB- CitB domain protein (372 aa)
     
  0.981
DM42_6865
annotation not available (313 aa)
 
   
  0.938
sdhC
succ_dehyd_cytB- succinate dehydrogenase, cytochrome b556 subunit (138 aa)
   
 
  0.826
DM42_7075
dhsB- succinate dehydrogenase and fumarate reductase iron-sulfur family protein (235 aa)
   
 
  0.808
sdhB
dhsB- succinate dehydrogenase and fumarate reductase iron-sulfur family protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family (233 aa)
   
 
  0.808
WI67_11925
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (507 aa)
   
   
  0.781
nuoD
NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family (417 aa)
   
 
  0.770
sdhD
Succ_dehyd_anc- succinate dehydrogenase, hydrophobic membrane anchor protein (122 aa)
   
 
  0.739
prpF
3-methylitaconate isomerase; prpF- putative AcnD-accessory protein PrpF (396 aa)
            0.730
WL94_08095
pyrD_sub1_fam- dihydroorotate dehydrogenase family domain protein (438 aa)
   
 
  0.717
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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