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STRINGSTRING
DM43_4652 protein (Burkholderia cepacia) - STRING interaction network
"DM43_4652" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM43_4652annotation not available (163 aa)    
Predicted Functional Partners:
WL94_18405
annotation not available (286 aa)
 
          0.751
WL94_18415
annotation not available (466 aa)
 
     
  0.715
DM42_4595
annotation not available (124 aa)
   
          0.715
WL94_18410
annotation not available (308 aa)
 
          0.663
DM42_3465
annotation not available (154 aa)
   
          0.613
WL94_18400
HAD_type_II- haloacid dehalogenase, type II (222 aa)
 
          0.595
WL94_18390
annotation not available (527 aa)
 
          0.565
WL94_18425
annotation not available (490 aa)
              0.559
WL94_18355
annotation not available (441 aa)
 
          0.538
WL94_18370
annotation not available (425 aa)
 
          0.526
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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