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WL94_18375 protein (Burkholderia cepacia) - STRING interaction network
"WL94_18375" - ABC transporter in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_18375ABC transporter; nickel_nikE- nickel import ATP-binding protein NikE; Belongs to the ABC transporter superfamily (622 aa)    
Predicted Functional Partners:
WL94_18380
annotation not available (319 aa)
 
  0.975
WL94_18385
annotation not available (317 aa)
 
 
  0.954
WL94_18390
annotation not available (527 aa)
   
  0.911
WL94_18370
annotation not available (425 aa)
 
          0.722
WL94_04810
annotation not available (336 aa)
 
 
  0.703
WL94_29680
annotation not available (367 aa)
 
  0.693
WL94_04805
annotation not available (289 aa)
 
  0.684
WL94_29685
annotation not available (350 aa)
 
 
  0.675
WL94_39480
annotation not available (365 aa)
 
  0.674
oppC
annotation not available (300 aa)
 
  0.672
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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