STRINGSTRING
DM42_6905 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6905" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6905annotation not available (244 aa)    
Predicted Functional Partners:
DM42_6904
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (203 aa)
 
 
 
  0.977
DM42_6915
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (234 aa)
 
 
 
  0.820
DM42_6906
annotation not available (277 aa)
 
          0.782
DM42_6908
annotation not available (208 aa)
 
          0.709
DM42_6909
annotation not available (434 aa)
 
   
  0.687
DM42_6907
annotation not available (366 aa)
 
          0.679
DM42_6910
Conserved hypothetical protein (284 aa)
 
          0.654
DM42_7351
annotation not available (619 aa)
 
     
  0.648
DM42_6903
annotation not available (189 aa)
 
          0.553
DM42_6911
annotation not available (405 aa)
 
          0.494
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (14%) [HD]