STRINGSTRING
DM42_6955 protein (Burkholderia cepacia) - STRING interaction network
"DM42_6955" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_6955annotation not available (466 aa)    
Predicted Functional Partners:
DM42_6956
Conserved hypothetical protein (261 aa)
 
 
  0.985
DM42_6954
annotation not available (230 aa)
 
  0.925
DM42_6957
Conserved hypothetical protein (420 aa)
              0.823
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (677 aa)
 
 
  0.745
WL94_33040
Uncharacterized protein (247 aa)
 
 
  0.709
argA
N-Ac-Glu-synth- amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily (459 aa)
   
        0.643
WI67_04090
DUF1571 domain-containing protein (210 aa)
   
 
  0.612
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (229 aa)
   
 
  0.612
WL94_14615
annotation not available (214 aa)
   
 
  0.612
DM42_1873
annotation not available (243 aa)
   
          0.531
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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