• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
WL94_17040 protein (Burkholderia cepacia) - STRING interaction network
"WL94_17040" - Anti-sigma factor in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_17040Anti-sigma factor; Anti sigma-E RseA, N-terminal domain protein (205 aa)    
Predicted Functional Partners:
WI67_05475
annotation not available (350 aa)
 
 
  0.995
WI67_05480
Periplasmic serine endoprotease DegP-like; degP_htrA_DO- peptidase Do family protein; Belongs to the peptidase S1C family (498 aa)
   
 
  0.916
rpoE
rpoE_Sigma70- RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily (199 aa)
   
 
  0.847
WL94_17055
Thioredoxin family protein (78 aa)
              0.835
rseP
annotation not available (456 aa)
     
 
  0.786
flgM
flgM_jcvi- flagellar biosynthesis anti-sigma factor FlgM (108 aa)
   
     
  0.628
WL94_05630
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (261 aa)
   
 
  0.621
WL94_21160
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (171 aa)
   
 
  0.619
WL94_36950
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (185 aa)
   
 
  0.619
DM42_6915
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (234 aa)
   
 
  0.619
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (10%) [HD]