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rpoE protein (Burkholderia cepacia) - STRING interaction network
rpoE_Sigma70: RNA polymerase sigma factor RpoE in Burkholderia cepacia
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpoErpoE_Sigma70- RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily (199 aa)    
Predicted Functional Partners:
WI67_05475
annotation not available (350 aa)
 
  0.949
WL94_17040
Anti-sigma factor; Anti sigma-E RseA, N-terminal domain protein (205 aa)
   
 
  0.847
WI67_05480
Periplasmic serine endoprotease DegP-like; degP_htrA_DO- peptidase Do family protein; Belongs to the peptidase S1C family (498 aa)
   
   
  0.687
WI67_13485
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (326 aa)
 
     
  0.686
WI67_31805
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis; Belongs to the IspH family (313 aa)
 
     
  0.657
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (278 aa)
 
          0.641
WL94_14085
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (501 aa)
   
     
  0.622
WL94_37205
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (477 aa)
   
     
  0.621
rpoH
rpoH_proteo- alternative sigma factor RpoH (311 aa)
     
 
  0.607
WL94_17055
Thioredoxin family protein (78 aa)
   
   
  0.603
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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