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DM42_7002 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7002" - ccmA: heme ABC exporter, ATP-binding protein CcmA in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7002ccmA- heme ABC exporter, ATP-binding protein CcmA (528 aa)    
Predicted Functional Partners:
WL94_33235
annotation not available (350 aa)
   
  0.972
WL94_38740
annotation not available (335 aa)
   
  0.806
DM42_4319
annotation not available (325 aa)
   
  0.805
DM42_4318
annotation not available (331 aa)
   
  0.802
WI67_02865
annotation not available (338 aa)
   
  0.790
WI67_32120
annotation not available (337 aa)
   
  0.789
WL94_27460
annotation not available (341 aa)
   
  0.778
WL94_28030
annotation not available (312 aa)
          0.771
WL94_35415
annotation not available (345 aa)
          0.761
WL94_28780
annotation not available (339 aa)
   
  0.759
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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