STRINGSTRING
DM42_7009 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7009" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7009annotation not available (191 aa)    
Predicted Functional Partners:
DM42_7008
Oxido_grp_1- luciferase oxidoreductase, group 1 family protein (379 aa)
 
        0.907
WL94_04815
annotation not available (546 aa)
 
          0.746
WL94_04830
Monooxygenase; FMN_nitrolo- FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein (435 aa)
 
        0.635
WI67_25435
Uncharacterized protein (179 aa)
   
          0.577
WL94_04810
annotation not available (336 aa)
 
          0.572
DM42_4148
annotation not available (243 aa)
 
   
  0.511
DM42_6627
Conserved hypothetical protein (668 aa)
 
 
      0.504
WL94_06245
Monooxygenase; FMN_nitrolo- FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein (450 aa)
 
        0.492
WL94_04805
annotation not available (289 aa)
              0.484
DM42_6817
annotation not available (1103 aa)
   
          0.483
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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