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DM42_7014 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7014" - DUF2909 domain-containing protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7014DUF2909 domain-containing protein (70 aa)    
Predicted Functional Partners:
WL94_37520
Uncharacterized protein (116 aa)
              0.846
WI67_21860
annotation not available (89 aa)
   
          0.756
WI67_02915
annotation not available (187 aa)
   
          0.756
WI67_13185
DUF3460 domain-containing protein (62 aa)
   
          0.752
WI67_05165
annotation not available (155 aa)
   
          0.744
WI67_14170
Uncharacterized protein (195 aa)
   
          0.710
WI67_15175
annotation not available (208 aa)
 
          0.706
DM42_2157
Uncharacterized protein (85 aa)
   
          0.697
WL94_30915
NfeD family protein; nfeD-like C-terminal, partner-binding family protein (144 aa)
   
          0.691
WL94_02815
annotation not available (215 aa)
   
          0.656
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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