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DM42_7035 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7035" - outer_NodT: efflux transporter, outer membrane factor in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DM42_7035outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (533 aa)    
Predicted Functional Partners:
DM42_7037
RND_mfp- efflux transporter, RND family, MFP subunit (462 aa)
 
 
  0.814
DM42_7036
efflux_EmrB- drug resistance MFS transporter, drug-H+ antiporter-2 family protein (530 aa)
 
     
  0.772
WL94_09545
Hemolysin secretion protein D; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (398 aa)
 
 
  0.655
WL94_34115
annotation not available (424 aa)
 
  0.652
DM42_7397
annotation not available (412 aa)
 
  0.649
WL94_33540
Hemolysin secretion protein D; RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (399 aa)
 
 
  0.616
WL94_28905
RND_mfp- efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (400 aa)
 
 
  0.613
acrA
annotation not available (415 aa)
 
  0.607
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (677 aa)
   
 
  0.598
WL94_09550
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1057 aa)
 
  0.568
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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