STRINGSTRING
xylC protein (Burkholderia cepacia) - STRING interaction network
"xylC" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylCannotation not available (489 aa)    
Predicted Functional Partners:
WL94_37385
Aryl-alcohol dehydrogenase (375 aa)
 
  0.986
mdlC
annotation not available (534 aa)
 
 
  0.911
WL94_37430
annotation not available (340 aa)
   
 
  0.907
nit2
annotation not available (307 aa)
     
 
  0.903
DM42_5250
annotation not available (98 aa)
         
  0.902
DM42_5722
ubiX_pad- polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein (204 aa)
         
  0.902
ubiX
Flavin prenyltransferase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN (198 aa)
         
  0.902
benB
benzo_1_2_benB- benzoate 1,2-dioxygenase, small subunit (162 aa)
     
 
    0.901
cbdA
annotation not available (452 aa)
         
    0.900
DM42_2487
annotation not available (483 aa)
   
   
 
0.823
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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