STRINGSTRING
DM42_7070 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7070" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7070annotation not available (387 aa)    
Predicted Functional Partners:
DM42_3783
Conserved hypothetical protein (889 aa)
   
          0.744
DM42_7197
Conserved hypothetical protein (724 aa)
   
          0.733
DM42_2944
Conserved hypothetical protein (267 aa)
   
          0.689
WL94_36950
sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (185 aa)
   
          0.682
xylC
annotation not available (489 aa)
 
 
  0.608
WL94_37385
Aryl-alcohol dehydrogenase (375 aa)
 
          0.572
WL94_37045
Uncharacterized protein (151 aa)
   
          0.572
DM42_1652
annotation not available (125 aa)
   
          0.568
DM42_7175
annotation not available (224 aa)
   
          0.561
DM42_3786
type_I_sec_TolC- type I secretion outer membrane , TolC family protein (484 aa)
   
          0.556
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (19%) [HD]