STRINGSTRING
glgX protein (Burkholderia cepacia) - STRING interaction network
glgX_debranch: glycogen debranching enzyme GlgX in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgXglgX_debranch- glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family (704 aa)    
Predicted Functional Partners:
treY
trehalose_TreY- malto-oligosyltrehalose synthase (921 aa)
 
  0.998
treS
Alpha-amylase; treS_nterm- trehalose synthase (1136 aa)
 
  0.998
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (735 aa)
 
 
0.998
malQ
malQ- 4-alpha-glucanotransferase (743 aa)
   
  0.996
treZ
trehalose_TreZ- malto-oligosyltrehalose trehalohydrolase (623 aa)
 
   
0.970
glgE
Alpha-1,4-glucan-maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (1130 aa)
 
   
  0.963
WL94_26830
annotation not available (550 aa)
   
  0.948
argS
argS- arginine--tRNA ligase (593 aa)
           
  0.645
WL94_27605
yihY_not_rbn- YihY family inner membrane domain protein (442 aa)
         
  0.625
WI67_22095
Ribonuclease; yihY_not_rbn- YihY family inner membrane domain protein (317 aa)
         
  0.595
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (20%) [HD]