STRINGSTRING
katE protein (Burkholderia cepacia) - STRING interaction network
"katE" - Catalase in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katECatalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)    
Predicted Functional Partners:
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (417 aa)
      
 
    0.904
ligD
NHEJ_ligase_prk- DNA ligase D (948 aa)
 
     
  0.849
WI67_11050
annotation not available (159 aa)
   
 
  0.843
WL94_15815
annotation not available (1567 aa)
     
 
  0.833
WI67_13155
annotation not available (178 aa)
 
 
  0.832
ahpC
Alkyl hydroperoxide reductase; ahpC- peroxiredoxin (187 aa)
   
 
  0.814
DM42_3157
annotation not available (182 aa)
   
 
  0.807
WI67_03875
Peroxidase; C-terminal domain of 1-Cys peroxiredoxin family protein (212 aa)
   
 
  0.807
DM42_7099
Ku_bact- Ku protein (338 aa)
 
        0.787
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (364 aa)
   
 
  0.780
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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