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STRINGSTRING
DM42_7128 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7128" - annotation not available in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7128annotation not available (768 aa)    
Predicted Functional Partners:
WL94_03890
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (225 aa)
 
  0.790
WL94_27110
annotation not available (769 aa)
 
 
 
  0.787
DM42_1572
annotation not available (751 aa)
     
 
  0.786
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (917 aa)
   
   
  0.775
WI67_28695
Transcriptional regulatory , C terminal family protein (236 aa)
 
 
  0.759
WL94_18315
annotation not available (277 aa)
 
  0.750
DM42_7129
annotation not available (231 aa)
 
          0.744
WI67_23570
Two-component system response regulator; Transcriptional regulatory , C terminal family protein (226 aa)
 
  0.730
DM42_7034
Transcriptional regulatory , C terminal family protein (236 aa)
 
 
  0.724
DM42_6829
annotation not available (271 aa)
 
  0.708
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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