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DM42_7153 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7153" - annotation not available in Burkholderia cepacia
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7153annotation not available (509 aa)    
Predicted Functional Partners:
WL94_15815
annotation not available (1567 aa)
   
   
  0.804
nirB
nitri_red_nirB- nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family (865 aa)
 
 
0.726
DM42_7152
Conserved hypothetical protein (125 aa)
              0.707
DM42_967
annotation not available (56 aa)
 
 
  0.679
rubA2
annotation not available (60 aa)
   
 
  0.655
WI67_30465
annotation not available (61 aa)
   
 
  0.627
WL94_05490
annotation not available (1395 aa)
   
  0.612
fdh
Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily (386 aa)
 
   
  0.589
WL94_39080
annotation not available (1062 aa)
 
   
  0.541
WL94_25230
soxA- sarcosine oxidase, alpha subunit; Belongs to the GcvT family (1003 aa)
   
 
  0.500
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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