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DM42_7236 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7236" - annotation not available in Burkholderia cepacia
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7236annotation not available (423 aa)    
Predicted Functional Partners:
sufS
sufS- cysteine desulfurase, SufS family protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family (666 aa)
       
  0.909
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (354 aa)
     
 
  0.907
megL
annotation not available (352 aa)
     
 
  0.907
mdeA
annotation not available (402 aa)
     
 
  0.907
DM42_7237
Conserved hypothetical protein (90 aa)
 
          0.863
trxB
TRX_reduct- thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (320 aa)
   
   
0.821
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (704 aa)
   
 
  0.653
WL94_15815
annotation not available (1567 aa)
   
   
  0.629
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (718 aa)
   
 
  0.614
DM42_7351
annotation not available (619 aa)
   
 
  0.610
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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