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DM42_7246 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7246" - Transcriptional regulatory , C terminal family protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7246Transcriptional regulatory , C terminal family protein (973 aa)    
Predicted Functional Partners:
DM42_7245
annotation not available (632 aa)
 
          0.628
DM42_7244
annotation not available (224 aa)
 
          0.621
DM42_7231
Conserved hypothetical protein (143 aa)
   
          0.542
DM42_7212
Conserved hypothetical protein (722 aa)
   
          0.520
WL94_32745
annotation not available (494 aa)
       
 
  0.459
WL94_14490
annotation not available (511 aa)
       
 
  0.459
WL94_26375
annotation not available (510 aa)
       
 
  0.459
DM42_7247
annotation not available (306 aa)
 
     
  0.448
WL94_37765
annotation not available (753 aa)
   
        0.442
WL94_02010
annotation not available (425 aa)
   
          0.438
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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