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DM42_7262 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7262" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7262Conserved hypothetical protein (92 aa)    
Predicted Functional Partners:
DM42_7260
annotation not available (89 aa)
              0.845
DM42_5587
Conserved hypothetical protein (91 aa)
   
          0.768
DM42_3497
Conserved hypothetical protein (108 aa)
   
          0.768
DM42_5267
Conserved hypothetical protein (83 aa)
   
          0.767
WL94_13140
Purine-nucleoside phosphorylase (103 aa)
   
          0.758
DM42_6288
Conserved hypothetical protein (99 aa)
   
          0.758
WI67_27440
Uncharacterized protein (109 aa)
   
          0.758
DM42_2604
Conserved hypothetical protein (251 aa)
   
          0.754
DM42_4555
Conserved hypothetical protein (115 aa)
   
          0.752
flgM
flgM_jcvi- flagellar biosynthesis anti-sigma factor FlgM (108 aa)
   
          0.752
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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