STRINGSTRING
DM42_7268 protein (Burkholderia cepacia) - STRING interaction network
"DM42_7268" - Conserved hypothetical protein in Burkholderia cepacia
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM42_7268Conserved hypothetical protein (101 aa)    
Predicted Functional Partners:
WI67_07380
DNA-binding protein (85 aa)
   
          0.776
WI67_16380
Uncharacterized protein (70 aa)
   
          0.775
WL94_28705
Uncharacterized protein (140 aa)
   
          0.774
DM42_5267
Conserved hypothetical protein (83 aa)
   
          0.770
WI67_12995
annotation not available (184 aa)
   
          0.765
VL15_06225
Transposase (132 aa)
   
          0.756
DM42_7327
Conserved hypothetical protein (92 aa)
   
          0.751
WI67_00475
annotation not available (188 aa)
   
          0.745
DM42_1247
Conserved hypothetical protein (104 aa)
   
          0.745
WL94_15270
annotation not available (592 aa)
   
          0.741
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
Server load: low (18%) [HD]