STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WL94_34005Uncharacterized protein; RND_mfp: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (325 aa)    
Predicted Functional Partners:
WL94_33995
annotation not available
 
 0.973
WL94_34010
outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
 
 
 0.961
WL94_34000
DUF1656 domain-containing protein
 
     0.961
DM42_7421
annotation not available
 
 
 
 0.917
DM42_6192
annotation not available
 
 0.729
WL94_11780
annotation not available
 
 0.694
fusB
Fusaric acid resistance protein FusB; Involved in the resistance (detoxification) of the fungal toxin fusaric acid
 
 0.671
WL94_34015
Transporter; Mop: molybdenum-pterin binding domain protein
 
     0.573
DM42_4957
outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
 
 
 0.561
WL94_27575
outer_NodT: efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
 
 
 0.507
Your Current Organism:
Burkholderia cepacia
NCBI taxonomy Id: 292
Other names: ATCC 25416, B. cepacia, Burkholderia cepacia, Burkholderia cepacia genomovar I, CCUG 12691, CCUG 13226, CFBP 2227, CIP 80.24, DSM 7288, ICMP 5796, IFO 14074, JCM 5964, NBRC 14074, NCCB 76047, NCPPB 2993, NCTC 10743, NRRL B-14810, Pseudomonas cepacia, Pseudomonas kingii, Pseudomonas multivorans, strain 717-ICPB 25, strain Ballard 717
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