STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63025.1annotation not available (222 aa)    
Predicted Functional Partners:
ABF63024.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil
  
    0.907
ABF63199.1
annotation not available
  
 
  0.904
ABF63213.1
annotation not available
  
 
  0.903
ABF65232.1
annotation not available
    
  0.902
ABF65233.1
annotation not available
    
 0.902
ABF65234.1
annotation not available
    
 0.902
crcB
Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity
       0.885
ABF63462.1
annotation not available
  
  
0.849
ABF64904.1
annotation not available
  
  
 
0.817
ABF63026.1
annotation not available
       0.730
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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