STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63133.1annotation not available (62 aa)    
Predicted Functional Partners:
ABF63131.1
annotation not available
 
     0.923
ABF63130.1
annotation not available
 
     0.921
ABF63132.1
annotation not available
 
     0.898
ABF63136.1
annotation not available
 
     0.832
ABF63127.1
annotation not available
 
     0.830
ABF63126.1
annotation not available
 
     0.827
ABF63129.1
annotation not available
 
     0.808
ABF63137.1
annotation not available
 
     0.799
ABF63134.1
annotation not available
 
     0.769
ABF65308.1
annotation not available
  
     0.739
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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