STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63240.1annotation not available (109 aa)    
Predicted Functional Partners:
ABF63241.1
annotation not available
 
     0.735
ABF63242.1
annotation not available
       0.645
ABF63239.1
annotation not available
 
     0.593
ABF65114.1
Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family
  
     0.463
ABF65747.1
annotation not available
 
     0.435
ABF64183.1
annotation not available
  
     0.416
ABF65502.1
annotation not available
  
     0.410
ABF63355.1
annotation not available
  
     0.405
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >