STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63259.1annotation not available (276 aa)    
Predicted Functional Partners:
ABF65530.1
annotation not available
    
 0.948
ABF63256.1
annotation not available
 
   
 0.939
ABF63258.1
annotation not available
 
  
 0.836
ABF63257.1
annotation not available
 
     0.831
ABF62890.1
annotation not available
 
  
 0.753
ABF65662.1
annotation not available
 
   
 0.745
ABF64182.1
annotation not available
 
   
 0.730
ABF64812.1
annotation not available
 
  
 0.722
ABF65179.1
annotation not available
  
  
 0.702
ABF64865.1
annotation not available
  
  
 0.691
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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