STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63341.1Phosphate transporter. (494 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase / sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
  
 0.642
ABF64628.1
TrkA-C.
  
 
 0.533
ABF63340.1
Hypothetical protein.
       0.523
ABF65555.1
Glutamate synthase (NADPH) large subunit.
  
  
 0.523
ABF63401.1
NUDIX hydrolase.
 
  
 0.510
ABF63343.1
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.462
ABF64888.1
Diguanylate cyclase/phosphodiesterase.
     
 0.446
ABF65134.1
Non-ribosomal peptide synthetase.
  
  
 0.444
ABF63342.1
Hypothetical protein.
       0.422
ABF64240.1
Periplasmic sensor signal transduction histidine kinase.
  
  
 0.417
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.