STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63465.1annotation not available (387 aa)    
Predicted Functional Partners:
ABF63470.1
annotation not available
 
 0.979
ABF64295.1
annotation not available
  
 0.940
ABF65508.1
annotation not available
  
 0.921
ABF63471.1
annotation not available
  
 
 0.917
ABF63466.1
annotation not available
       0.845
ABF64971.1
annotation not available
  
  
 
0.831
ABF65158.1
annotation not available
 
 0.813
ABF65159.1
annotation not available
 
 0.697
ABF63473.1
annotation not available
 
 
 0.660
ABF63472.1
annotation not available
 
 
 0.645
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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