STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
croannotation not available (123 aa)    
Predicted Functional Partners:
ABF63549.1
annotation not available
 
 
 0.989
ABF63550.1
annotation not available
       0.549
ABF63551.1
annotation not available
       0.549
ABF63552.1
annotation not available
       0.421
ABF63553.1
annotation not available
       0.421
ABF63554.1
annotation not available
       0.421
ABF63555.1
annotation not available
       0.421
ABF63556.1
annotation not available
       0.421
ABF63557.1
annotation not available
       0.421
ABF63558.1
annotation not available
       0.421
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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