STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63569.1annotation not available (266 aa)    
Predicted Functional Partners:
ABF63571.1
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family
 
 0.994
ABF63568.1
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine
 
 0.992
ABF63570.1
annotation not available
0.989
ABF63057.1
annotation not available
 0.966
ABF63056.1
annotation not available
 
 
 0.939
ABF65716.1
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine
  
 0.933
ABF63059.1
annotation not available
 
 0.924
ABF65714.1
annotation not available
 
 0.900
ABF63058.1
annotation not available
  
  
 
0.848
ABF65721.1
annotation not available
 
 0.808
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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