STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63626.1annotation not available (482 aa)    
Predicted Functional Partners:
ABF64083.1
annotation not available
  
     0.746
ABF63390.1
annotation not available
  
     0.740
ABF65045.1
annotation not available
  
     0.736
ABF64206.1
annotation not available
  
     0.728
ABF65157.1
annotation not available
  
     0.726
ABF64722.1
annotation not available
  
     0.723
ABF65086.1
annotation not available
  
     0.720
ABF65085.1
annotation not available
  
     0.708
ABF65165.1
annotation not available
  
     0.708
ABF64516.1
annotation not available
  
     0.703
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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