STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63654.1annotation not available (251 aa)    
Predicted Functional Partners:
purH
annotation not available
 
  
 
 0.586
ABF63655.1
annotation not available
       0.535
ABF63787.1
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
 
 
 0.528
ABF62914.1
annotation not available
 
 
 0.520
ABF63954.1
annotation not available
 
 
 0.504
ABF63834.1
annotation not available
 
 
 0.503
ABF63835.1
annotation not available
 
   0.487
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >