ABF63661.1 protein (Ruegeria sp. TM1040) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

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Predicted Interactions

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Score

ABF63661.1

annotation not available (138 aa)

Predicted Functional Partners:

hemE

0.551

ABF62916.1

0.542

ABF63662.1

0.534

polA

0.491

ABF62832.1

0.428

ABF62831.1

0.402

Your Current Organism:

Ruegeria sp. TM1040

NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABF62831.1	ABF62832.1	TM1040_0098	TM1040_0099	annotation not available	annotation not available	0.998
ABF62831.1	ABF63661.1	TM1040_0098	TM1040_0928	annotation not available	annotation not available	0.402
ABF62832.1	ABF62831.1	TM1040_0099	TM1040_0098	annotation not available	annotation not available	0.998
ABF62832.1	ABF63661.1	TM1040_0099	TM1040_0928	annotation not available	annotation not available	0.428
ABF62916.1	ABF63661.1	TM1040_0183	TM1040_0928	annotation not available	annotation not available	0.542
ABF62916.1	hemE	TM1040_0183	TM1040_2528	annotation not available	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.555
ABF62916.1	polA	TM1040_0183	TM1040_2764	annotation not available	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.413
ABF63661.1	ABF62831.1	TM1040_0928	TM1040_0098	annotation not available	annotation not available	0.402
ABF63661.1	ABF62832.1	TM1040_0928	TM1040_0099	annotation not available	annotation not available	0.428
ABF63661.1	ABF62916.1	TM1040_0928	TM1040_0183	annotation not available	annotation not available	0.542
ABF63661.1	ABF63662.1	TM1040_0928	TM1040_0929	annotation not available	annotation not available	0.534
ABF63661.1	hemE	TM1040_0928	TM1040_2528	annotation not available	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.551
ABF63661.1	polA	TM1040_0928	TM1040_2764	annotation not available	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.491
ABF63662.1	ABF63661.1	TM1040_0929	TM1040_0928	annotation not available	annotation not available	0.534
hemE	ABF62916.1	TM1040_2528	TM1040_0183	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	annotation not available	0.555
hemE	ABF63661.1	TM1040_2528	TM1040_0928	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	annotation not available	0.551
hemE	polA	TM1040_2528	TM1040_2764	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.681
polA	ABF62916.1	TM1040_2764	TM1040_0183	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	annotation not available	0.413
polA	ABF63661.1	TM1040_2764	TM1040_0928	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	annotation not available	0.491
polA	hemE	TM1040_2764	TM1040_2528	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.681

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