STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcpOMethyl-accepting chemotaxis sensory transducer. (590 aa)    
Predicted Functional Partners:
cheR3
MCP methyltransferase, CheR-type.
 
 0.990
cheR4
Signal transduction histidine kinase with CheB and CheR activity.
 
 0.984
cheR5
MCP methyltransferase, CheR-type.
 
 0.965
ABF63764.1
Response regulator receiver protein.
 
 
 0.618
ABF62869.1
Response regulator receiver protein.
 
 
 0.571
ABF64730.1
Response regulator receiver protein.
 
   0.560
fliI
Flagellum-specific ATP synthase.
 
   0.546
aer
Aerotaxis receptor.
    0.536
flhA
Flagellar biosynthesis protein flhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.532
fliG
Flagellar motor switch protein fliG.
 
  
 0.523
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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