STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63834.1annotation not available (290 aa)    
Predicted Functional Partners:
ABF63839.1
annotation not available
 
 0.984
ABF63835.1
annotation not available
  
 0.965
ABF65387.1
annotation not available
  
 0.918
ABF62807.1
annotation not available
  
 0.916
ABF62829.1
annotation not available
  
 0.916
ABF63836.1
annotation not available
 
  
 0.861
ABF63468.1
annotation not available
  
 
  0.860
ABF63247.1
annotation not available
  
  
 
0.840
ABF64295.1
annotation not available
  
 
 0.839
ABF64086.1
annotation not available
  
  
0.838
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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