STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (511 aa)    
Predicted Functional Partners:
ABF63922.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.998
ABF63920.1
Sugar ABC transporter (sugar-binding protein).
 
 0.993
ABF63102.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.940
ABF63923.1
Transcriptional regulator, DeoR family.
 
  
 0.838
ABF63101.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.820
ABF63927.1
Carbohydrate kinase FGGY; Belongs to the FGGY kinase family.
 
  
 0.796
ABF63924.1
Aldo/keto reductase.
 
   
 0.793
ABF63926.1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase.
 
  
 0.713
ABF63925.1
FAD dependent oxidoreductase.
 
   
 0.643
ABF63228.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.589
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Silicibacter sp. TM1040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.