STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF63926.1annotation not available (278 aa)    
Predicted Functional Partners:
ABF63927.1
annotation not available
 
 0.986
ABF63925.1
annotation not available
 
     0.938
ABF63920.1
annotation not available
 
 
 0.920
ABF62807.1
annotation not available
  
 
 0.904
ABF62829.1
annotation not available
  
 
 0.904
ABF63170.1
annotation not available
  
 
 0.904
ABF63248.1
annotation not available
  
 
 0.904
ABF65387.1
annotation not available
  
 
 0.904
ABF65514.1
annotation not available
  
 
 0.904
ABF63922.1
annotation not available
 
  
 0.900
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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